LOCUS NC_005773 5928787 bp DNA circular BCT 22-JUN-2007
DEFINITION Pseudomonas syringae pv. phaseolicola 1448A, complete genome.
ACCESSION NC_005773
VERSION NC_005773.3 GI:71733195
KEYWORDS .
SOURCE Pseudomonas syringae pv. phaseolicola 1448A
ORGANISM Pseudomonas syringae pv. phaseolicola 1448A
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 5928787)
AUTHORS Joardar,V., Lindeberg,M., Jackson,R.W., Selengut,J., Dodson,R.,
Brinkac,L.M., Daugherty,S.C., Deboy,R., Durkin,A.S., Giglio,M.G.,
Madupu,R., Nelson,W.C., Rosovitz,M.J., Sullivan,S., Crabtree,J.,
Creasy,T., Davidsen,T., Haft,D.H., Zafar,N., Zhou,L., Halpin,R.,
Holley,T., Khouri,H., Feldblyum,T., White,O., Fraser,C.M.,
Chatterjee,A.K., Cartinhour,S., Schneider,D.J., Mansfield,J.,
Collmer,A. and Buell,C.R.
TITLE Whole-genome sequence analysis of Pseudomonas syringae pv.
phaseolicola 1448A reveals divergence among pathovars in genes
involved in virulence and transposition
JOURNAL J. Bacteriol. 187 (18), 6488-6498 (2005)
PUBMED 16159782
REFERENCE 2 (bases 1 to 5928787)
AUTHORS Joardar,V., Lindeberg,M., Jackson,R., Selengut,J., Dodson,R.,
Brinkac,L.M., Daugherty,S.C., DeBoy,R.T., Durkin,A.S., Giglio,M.G.,
Madupu,R., Nelson,W.C., Rosovitz,M.J., Sullivan,S.A., Crabtree,J.,
Creasy,T., Davidsen,T.M., Haft,D.H., Zafar,N., Zhou,L., Halpin,R.,
Holley,T., Khouri,H.M., Feldblyum,T.V., White,O., Fraser,C.M.,
Chatterjee,A.K., Cartinhour,S., Schneider,D., Mansfield,J.,
Collmer,A. and Buell,R.
TITLE Direct Submission
JOURNAL Submitted (31-MAR-2005) The Institute for Genomic Research, 9712
Medical Center Dr, Rockville, MD 20850, USA
REFERENCE 3 (bases 1 to 5928787)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (04-MAR-2004) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000058.
On Aug 3, 2005 this sequence version replaced gi:51904981.
COMPLETENESS: full length.
Расположение РНК[]
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 109533 | 109609 | + | 77 | 71733195 | PSPPH_0098 | - | 11 Arg tRNA |
| 673159 | 673245 | - | 87 | 71733195 | PSPPH_0572 | - | 15 Leu tRNA |
| 673406 | 673492 | - | 87 | 71733195 | PSPPH_0573 | - | 15 Leu tRNA |
| 804015 | 805532 | + | 1518 | 71733195 | PSPPH_0689 | - | 16S ribosomal RNA |
| 805663 | 805739 | + | 77 | 71733195 | PSPPH_0690 | - | 14 Ile tRNA |
| 805770 | 805845 | + | 76 | 71733195 | PSPPH_0691 | - | 02 Ala tRNA |
| 806085 | 808986 | + | 2902 | 71733195 | PSPPH_0692 | - | 23S ribosomal RNA |
| 809136 | 809255 | + | 120 | 71733195 | PSPPH_0693 | - | 5S ribosomal RNA |
| 870876 | 870951 | + | 76 | 71733195 | PSPPH_0743 | - | 07 Asn tRNA |
| 870981 | 871057 | + | 77 | 71733195 | PSPPH_0744 | - | 03 Pro tRNA |
| 871063 | 871138 | + | 76 | 71733195 | PSPPH_0745 | - | 10 Lys tRNA |
| 871234 | 871310 | + | 77 | 71733195 | PSPPH_0746 | - | 03 Pro tRNA |
| 1048750 | 1050267 | + | 1518 | 71733195 | PSPPH_0878 | - | 16S ribosomal RNA |
| 1050398 | 1050474 | + | 77 | 71733195 | PSPPH_0879 | - | 14 Ile tRNA |
| 1050505 | 1050580 | + | 76 | 71733195 | PSPPH_0880 | - | 02 Ala tRNA |
| 1050820 | 1053721 | + | 2902 | 71733195 | PSPPH_0881 | - | 23S ribosomal RNA |
| 1053871 | 1053990 | + | 120 | 71733195 | PSPPH_0882 | - | 5S ribosomal RNA |
| 1125905 | 1125981 | - | 77 | 71733195 | PSPPH_0948 | - | 16 Met tRNA |
| 1186141 | 1186215 | - | 75 | 71733195 | PSPPH_0992 | - | 05 Gln tRNA |
| 1510567 | 1510651 | - | 85 | 71733195 | PSPPH_1298 | - | 15 Leu tRNA |
| 1794902 | 1794991 | + | 90 | 71733195 | PSPPH_1541 | - | 08 Ser tRNA |
| 1827343 | 1827418 | + | 76 | 71733195 | PSPPH_1572 | - | 13 Val tRNA |
| 1827440 | 1827516 | + | 77 | 71733195 | PSPPH_1573 | - | 06 Asp tRNA |
| 1927620 | 1927695 | + | 76 | 71733195 | PSPPH_1665 | - | 13 Val tRNA |
| 1927762 | 1927838 | + | 77 | 71733195 | PSPPH_1666 | - | 06 Asp tRNA |
| 1927954 | 1928030 | + | 77 | 71733195 | PSPPH_1667 | - | 06 Asp tRNA |
| 1952561 | 1952637 | + | 77 | 71733195 | PSPPH_1688 | - | 11 Arg tRNA |
| 1952689 | 1952764 | + | 76 | 71733195 | PSPPH_1689 | - | 09 His tRNA |
| 1952821 | 1952905 | + | 85 | 71733195 | PSPPH_1690 | - | 15 Leu tRNA |
| 2143091 | 2143180 | - | 90 | 71733195 | PSPPH_1846 | - | 08 Ser tRNA |
| 2292475 | 2292550 | + | 76 | 71733195 | PSPPH_1943 | - | 02 Ala tRNA |
| 2292639 | 2292714 | + | 76 | 71733195 | PSPPH_1944 | - | 04 Glu tRNA |
| 2292767 | 2292842 | + | 76 | 71733195 | PSPPH_1945 | - | 02 Ala tRNA |
| 2292889 | 2292964 | + | 76 | 71733195 | PSPPH_1946 | - | 04 Glu tRNA |
| 2498536 | 2498612 | + | 77 | 71733195 | PSPPH_2143 | - | 03 Pro tRNA |
| 2706626 | 2706701 | + | 76 | 71733195 | PSPPH_2331 | - | 01 Gly tRNA |
| 2764709 | 2764782 | + | 74 | 71733195 | PSPPH_2382 | - | 19 Cys tRNA |
| 2778554 | 2778639 | - | 86 | 71733195 | PSPPH_2401 | - | 15 Leu tRNA |
| 2978401 | 2978477 | + | 77 | 71733195 | PSPPH_2586 | - | 13 Val tRNA |
| 3465909 | 3465984 | - | 76 | 71733195 | PSPPH_2985 | - | 07 Asn tRNA |
| 3576639 | 3576726 | + | 88 | 71733195 | PSPPH_3078 | - | 08 Ser tRNA |
| 3631440 | 3631559 | - | 120 | 71733195 | PSPPH_3131 | - | 5S ribosomal RNA |
| 3631709 | 3634610 | - | 2902 | 71733195 | PSPPH_3132 | - | 23S ribosomal RNA |
| 3634850 | 3634925 | - | 76 | 71733195 | PSPPH_3133 | - | 02 Ala tRNA |
| 3634956 | 3635032 | - | 77 | 71733195 | PSPPH_3134 | - | 14 Ile tRNA |
| 3635163 | 3636680 | - | 1518 | 71733195 | PSPPH_3135 | - | 16S ribosomal RNA |
| 4042008 | 4042084 | - | 77 | 71733195 | PSPPH_3501 | - | 11 Arg tRNA |
| 4046117 | 4046193 | - | 77 | 71733195 | PSPPH_3507 | - | 11 Arg tRNA |
| 4046281 | 4046357 | - | 77 | 71733195 | PSPPH_3508 | - | 11 Arg tRNA |
| 4046467 | 4046557 | - | 91 | 71733195 | PSPPH_3509 | - | 08 Ser tRNA |
| 4168443 | 4168518 | - | 76 | 71733195 | PSPPH_3621 | - | 01 Gly tRNA |
| 4168523 | 4168598 | - | 76 | 71733195 | PSPPH_3622 | - | 04 Glu tRNA |
| 4168699 | 4168774 | - | 76 | 71733195 | PSPPH_3623 | - | 01 Gly tRNA |
| 4168777 | 4168852 | - | 76 | 71733195 | PSPPH_3624 | - | 04 Glu tRNA |
| 4314438 | 4314514 | - | 77 | 71733195 | PSPPH_3761 | - | 03 Pro tRNA |
| 4314610 | 4314685 | - | 76 | 71733195 | PSPPH_3762 | - | 10 Lys tRNA |
| 4336498 | 4336574 | + | 77 | 71733195 | PSPPH_3786 | - | 16 Met tRNA |
| 4336806 | 4336882 | + | 77 | 71733195 | PSPPH_3787 | - | 16 Met tRNA |
| 4547935 | 4548008 | + | 74 | 71733195 | PSPPH_3982 | - | 01 Gly tRNA |
| 4780755 | 4780831 | - | 77 | 71733195 | PSPPH_4192 | - | 16 Met tRNA |
| 4780927 | 4781012 | - | 86 | 71733195 | PSPPH_4193 | - | 15 Leu tRNA |
| 4804338 | 4804725 | + | 388 | 71733195 | PSPPH_4216 | - | sRNA |
| 5244035 | 5244110 | - | 76 | 71733195 | PSPPH_4606 | - | 20 Trp tRNA |
| 5244276 | 5244351 | - | 76 | 71733195 | PSPPH_4607 | - | 12 Thr tRNA |
| 5244378 | 5244451 | - | 74 | 71733195 | PSPPH_4608 | - | 01 Gly tRNA |
| 5244476 | 5244560 | - | 85 | 71733195 | PSPPH_4609 | - | 18 Tyr tRNA |
| 5246981 | 5247100 | - | 120 | 71733195 | PSPPH_4613 | - | 5S ribosomal RNA |
| 5247250 | 5250151 | - | 2902 | 71733195 | PSPPH_4614 | - | 23S ribosomal RNA |
| 5250391 | 5250466 | - | 76 | 71733195 | PSPPH_4615 | - | 02 Ala tRNA |
| 5250497 | 5250573 | - | 77 | 71733195 | PSPPH_4616 | - | 14 Ile tRNA |
| 5250704 | 5252221 | - | 1518 | 71733195 | PSPPH_4617 | - | 16S ribosomal RNA |
| 5323252 | 5323328 | - | 77 | 71733195 | PSPPH_4687 | - | 16 Met tRNA |
| 5323380 | 5323446 | - | 67 | 71733195 | PSPPH_4688 | - | 16 Met tRNA |
| 5605576 | 5605651 | + | 76 | 71733195 | PSPPH_4932 | - | 17 Phe tRNA |
| 5619186 | 5619261 | + | 76 | 71733195 | PSPPH_4945 | - | 12 Thr tRNA |
| 5778881 | 5779008 | + | 128 | 71733195 | PSPPH_r01 | - | 5S ribosomal RNA |
| 5779110 | 5779229 | - | 120 | 71733195 | PSPPH_5092 | - | 5S ribosomal RNA |
| 5779379 | 5782280 | - | 2902 | 71733195 | PSPPH_5093 | - | 23S ribosomal RNA |
| 5782520 | 5782595 | - | 76 | 71733195 | PSPPH_5094 | - | 02 Ala tRNA |
| 5782626 | 5782702 | - | 77 | 71733195 | PSPPH_5095 | - | 14 Ile tRNA |
| 5782833 | 5784350 | - | 1518 | 71733195 | PSPPH_5096 | - | 16S ribosomal RNA |